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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009896.1 RefSeqGene
- Range
-
5001..27803
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_70
mRNA and Protein(s)
-
NM_001099856.6 → NP_001093326.2 NF-kappa-B essential modulator isoform b
See identical proteins and their annotated locations for NP_001093326.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate promoter and initiates translation from an alternate in-frame upstream start codon compared to variant 1. The resulting isoform (b) has a longer N-terminus compared to isoform a.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS48196.1
- UniProtKB/TrEMBL
-
A0A087WUW6
- Related
- ENSP00000483825.1, ENST00000618670.4
- Conserved Domains (2) summary
-
- pfam11577
Location:112 → 179
- NEMO; NF-kappa-B essential modulator NEMO
- pfam16516
Location:327 → 412
- CC2-LZ; Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
-
NM_001099857.5 → NP_001093327.1 NF-kappa-B essential modulator isoform a
See identical proteins and their annotated locations for NP_001093327.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variants 1, 3, and 7, encodes isoform a.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS14757.1
- UniProtKB/Swiss-Prot
- Q7LBY6, Q7Z7F1, Q9Y6K9
- UniProtKB/TrEMBL
-
A0A087WUW6
- Related
- ENSP00000471166.1, ENST00000594239.6
- Conserved Domains (4) summary
-
- TIGR02168
Location:87 → 321
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:393 → 418
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:258 → 344
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001145255.4 → NP_001138727.1 NF-kappa-B essential modulator isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two in-frame exons in the central coding region compared to variant 1. The resulting isoform (c) lacks two internal protein segments compared to isoform a.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS48197.1
- UniProtKB/TrEMBL
-
A0A8I5KQX5
- Related
- ENSP00000478616.1, ENST00000611176.4
- Conserved Domains (2) summary
-
- pfam11577
Location:44 → 111
- NEMO; NF-kappa-B essential modulator NEMO
- cl15254
Location:203 → 245
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001321396.3 → NP_001308325.1 NF-kappa-B essential modulator isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), as well as variants 3, 5, and 7, encodes isoform a.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS14757.1
- UniProtKB/Swiss-Prot
- Q7LBY6, Q7Z7F1, Q9Y6K9
- UniProtKB/TrEMBL
-
A0A087WUW6
- Conserved Domains (4) summary
-
- TIGR02168
Location:87 → 321
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:393 → 418
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:258 → 344
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001321397.3 → NP_001308326.1 NF-kappa-B essential modulator isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variant 8, encodes isoform d.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS83513.1
- UniProtKB/TrEMBL
- A0A087X0G7, A0A087X1B1
- Related
- ENSP00000484023.1, ENST00000617207.4
- Conserved Domains (4) summary
-
- TIGR02169
Location:49 → 362
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:392 → 417
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:257 → 343
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001377312.1 → NP_001364241.1 NF-kappa-B essential modulator isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 1, 3, and 5, encodes isoform a.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS14757.1
- UniProtKB/Swiss-Prot
- Q7LBY6, Q7Z7F1, Q9Y6K9
- UniProtKB/TrEMBL
-
A0A087WUW6
- Related
- ENSP00000394934.2, ENST00000440286.6
- Conserved Domains (4) summary
-
- TIGR02168
Location:87 → 321
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:393 → 418
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:258 → 344
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001377313.1 → NP_001364242.1 NF-kappa-B essential modulator isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variant 6, encodes isoform d.
- Source sequence(s)
-
AC244090
- Consensus CDS
-
CCDS83513.1
- UniProtKB/TrEMBL
- A0A087X0G7, A0A087X1B1
- Conserved Domains (4) summary
-
- TIGR02169
Location:49 → 362
- SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:392 → 417
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:257 → 343
- UBAN; polyubiquitin binding domain of NEMO and related proteins
-
NM_001377314.1 → NP_001364243.1 NF-kappa-B essential modulator isoform e
Status: REVIEWED
- Source sequence(s)
-
AC244090
- UniProtKB/TrEMBL
-
A0A8I5KQX5
- Related
- ENSP00000508630.1, ENST00000689906.1
- Conserved Domains (4) summary
-
- cd09803
Location:206 → 292
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:341 → 366
- zf_C2H2_10; C2H2 type zinc-finger
- pfam12128
Location:44 → 185
- DUF3584; Protein of unknown function (DUF3584)
-
NM_001377315.1 → NP_001364244.1 NF-kappa-B essential modulator isoform f
Status: REVIEWED
- Source sequence(s)
-
AC244090
- UniProtKB/TrEMBL
-
A0A8I5KQX5
- Conserved Domains (3) summary
-
- cd09803
Location:135 → 221
- UBAN; polyubiquitin binding domain of NEMO and related proteins
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:270 → 295
- zf_C2H2_10; C2H2 type zinc-finger
-
NM_003639.4 → NP_003630.1 NF-kappa-B essential modulator isoform a
See identical proteins and their annotated locations for NP_003630.1
Status: REVIEWED
- Source sequence(s)
-
AF062089, AF261086, BC000299
- Consensus CDS
-
CCDS14757.1
- UniProtKB/Swiss-Prot
- Q7LBY6, Q7Z7F1, Q9Y6K9
- UniProtKB/TrEMBL
-
A0A087WUW6
- Related
- ENSP00000479662.1, ENST00000611071.4
- Conserved Domains (4) summary
-
- TIGR02168
Location:87 → 321
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam11577
Location:44 → 110
- NEMO; NF-kappa-B essential modulator NEMO
- pfam18414
Location:393 → 418
- zf_C2H2_10; C2H2 type zinc-finger
- cl15254
Location:258 → 344
- UBAN; polyubiquitin binding domain of NEMO and related proteins
RNA
-
NR_165197.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC244090
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
154541238..154565046
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
152777621..152801428
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)