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    Coq10b coenzyme Q10B [ Mus musculus (house mouse) ]

    Gene ID: 67876, updated on 2-Nov-2024

    Summary

    Official Symbol
    Coq10bprovided by MGI
    Official Full Name
    coenzyme Q10Bprovided by MGI
    Primary source
    MGI:MGI:1915126
    See related
    Ensembl:ENSMUSG00000025981 AllianceGenome:MGI:1915126
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500041J02Rik; 1700030I21Rik; 9530077A17Rik
    Summary
    Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration. Located in mitochondrion. Is expressed in heart and heart right ventricle. Orthologous to human COQ10B (coenzyme Q10B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in bladder adult (RPKM 24.6), adrenal adult (RPKM 11.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Coq10b in Genome Data Viewer
    Location:
    1 C1.2; 1 28.0 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (55091929..55111861)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (55052770..55072702)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930444A19 gene Neighboring gene ankyrin repeat domain 44 Neighboring gene STARR-seq mESC enhancer starr_00938 Neighboring gene STARR-positive B cell enhancer ABC_E4315 Neighboring gene STARR-positive B cell enhancer mm9_chr1:54898672-54898972 Neighboring gene STARR-seq mESC enhancer starr_00940 Neighboring gene STARR-positive B cell enhancer ABC_E11069 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:54970246-54970399 Neighboring gene STARR-positive B cell enhancer ABC_E11070 Neighboring gene STARR-seq mESC enhancer starr_00941 Neighboring gene STARR-seq mESC enhancer starr_00942 Neighboring gene splicing factor 3b, subunit 1 Neighboring gene STARR-seq mESC enhancer starr_00943 Neighboring gene STARR-positive B cell enhancer ABC_E7728 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_00944 Neighboring gene heat shock protein 1 (chaperonin) Neighboring gene heat shock protein 1 (chaperonin 10) Neighboring gene ribosomal protein L7A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ubiquinone binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cellular respiration IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    coenzyme Q-binding protein COQ10 homolog B, mitochondrial
    Names
    coenzyme Q10 homolog B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039710.1NP_001034799.1  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 1

      See identical proteins and their annotated locations for NP_001034799.1

      Status: VALIDATED

      Source sequence(s)
      AI462376, AK015454, AK168837
      Consensus CDS
      CCDS35568.1
      UniProtKB/Swiss-Prot
      Q3THF9, Q6P6N0, Q9D9R6
      UniProtKB/TrEMBL
      A0A0R4J066
      Related
      ENSMUSP00000027125.6, ENSMUST00000027125.7
      Conserved Domains (1) summary
      cd07813
      Location:82220
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
    2. NM_026424.3NP_080700.3  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 2

      See identical proteins and their annotated locations for NP_080700.3

      Status: VALIDATED

      Source sequence(s)
      AI462376, AK006551, AK015454, AK168837
      Consensus CDS
      CCDS14959.1
      UniProtKB/TrEMBL
      G5E8J7
      Related
      ENSMUSP00000084899.5, ENSMUST00000087617.11
      Conserved Domains (1) summary
      cd07813
      Location:36170
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      55091929..55111861
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)