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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286653.1 → NP_001273582.1 calcipressin-2 isoform 1
See identical proteins and their annotated locations for NP_001273582.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has an alternate 5' UTR exon, compared to variant 1. Variants 1, 3 and 5 encode the same isoform (1).
- Source sequence(s)
-
AC154204, CT025668
- Consensus CDS
-
CCDS28800.1
- UniProtKB/TrEMBL
- A0A2R8W6E8, Q8VIP4
- Related
- ENSMUSP00000039473.6, ENSMUST00000044895.13
- Conserved Domains (1) summary
-
- pfam04847
Location:80 → 236
- Calcipressin; Calcipressin
-
NM_001286654.1 → NP_001273583.1 calcipressin-2 isoform 2
See identical proteins and their annotated locations for NP_001273583.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and 5' coding region, compared to variant 1. The resultign isoform (2) has a shorter and distinct N-terminus, compared to isoform 1. Variants 2 and 4 encode the same isoform 2.
- Source sequence(s)
-
CT025668
- Consensus CDS
-
CCDS28801.1
- UniProtKB/Swiss-Prot
- Q8VIP5, Q9JHG2
- UniProtKB/TrEMBL
-
Q543P2
- Related
- ENSMUSP00000137211.2, ENSMUST00000177857.9
- Conserved Domains (1) summary
-
- pfam04847
Location:22 → 190
- Calcipressin
-
NM_001357742.1 → NP_001344671.1 calcipressin-2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1, 3 and 5 encode the same isoform (1).
- Source sequence(s)
-
AC154204, BC049096, CT025668
- Consensus CDS
-
CCDS28800.1
- UniProtKB/TrEMBL
- A0A2R8W6E8, Q8VIP4
- Related
- ENSMUSP00000154835.2, ENSMUST00000228972.2
- Conserved Domains (1) summary
-
- pfam04847
Location:80 → 236
- Calcipressin; Calcipressin
-
NM_030598.2 → NP_085101.1 calcipressin-2 isoform 2
See identical proteins and their annotated locations for NP_085101.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus, compared to isoform 1. Variants 2 and 4 encode the same isoform 2.
- Source sequence(s)
-
BC049096
- Consensus CDS
-
CCDS28801.1
- UniProtKB/Swiss-Prot
- Q8VIP5, Q9JHG2
- UniProtKB/TrEMBL
-
Q543P2
- Related
- ENSMUSP00000048013.5, ENSMUST00000044792.6
- Conserved Domains (1) summary
-
- pfam04847
Location:22 → 190
- Calcipressin
-
NM_207649.1 → NP_997532.1 calcipressin-2 isoform 1
See identical proteins and their annotated locations for NP_997532.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1). Variants 1, 3 and 5 encode the same isoform (1).
- Source sequence(s)
-
BB635249, BC049096, BY740155
- Consensus CDS
-
CCDS28800.1
- UniProtKB/TrEMBL
- A0A2R8W6E8, Q8VIP4
- Related
- ENSMUSP00000155082.2, ENSMUST00000229744.2
- Conserved Domains (1) summary
-
- pfam04847
Location:80 → 236
- Calcipressin; Calcipressin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
44112243..44350407
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)