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    ECM34 Ecm34p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856342, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ECM34
    Official Full Name
    Ecm34p
    Primary source
    SGD:S000001035
    Locus tag
    YHL043W
    See related
    AllianceGenome:SGD:S000001035; FungiDB:YHL043W; VEuPathDB:YHL043W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be involved in cell wall organization. Located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ECM34 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (14901..15413)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Pxp3p Neighboring gene DUP240 family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains. Pérez-Ortín JE, et al. Genome Res, 2002 Oct. PMID 12368245, Free PMC Article
    2. An evolutionary scenario for one of the largest yeast gene families. Despons L, et al. Trends Genet, 2006 Jan. PMID 16269202
    3. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    4. Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets. Shin JJ, et al. Dis Model Mech, 2016 Sep 1. PMID 27519690, Free PMC Article
    5. A lipid E-MAP identifies Ubx2 as a critical regulator of lipid saturation and lipid bilayer stress. Surma MA, et al. Mol Cell, 2013 Aug 22. PMID 23891562, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ecm34p
    NP_011820.1
    • hypothetical protein; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins; SWAT-GFP, seamless-GFP and mCherry C-terminal fusion proteins localize to the cytosol

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      14901..15413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179123.1 → NP_011820.1  TPA: Ecm34p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011820.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKS7, P38728
      Conserved Domains (1) summary
      pfam00674
      Location:125 → 169
      DUP; DUP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38728.1

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