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    Ppp2r5a protein phosphatase 2, regulatory subunit B', alpha [ Mus musculus (house mouse) ]

    Gene ID: 226849, updated on 2-Nov-2024

    Summary

    Official Symbol
    Ppp2r5aprovided by MGI
    Official Full Name
    protein phosphatase 2, regulatory subunit B', alphaprovided by MGI
    Primary source
    MGI:MGI:2388479
    See related
    Ensembl:ENSMUSG00000026626 AllianceGenome:MGI:2388479
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PR61alpha
    Summary
    Predicted to enable kinase binding activity; phosphoprotein phosphatase activity; and protein phosphatase activator activity. Predicted to be involved in negative regulation of lipid kinase activity; negative regulation of protein localization to plasma membrane; and protein dephosphorylation. Located in M band and Z disc. Is expressed in several structures, including brain; gonad; hemolymphoid system gland; liver; and neural retina. Orthologous to human PPP2R5A (protein phosphatase 2 regulatory subunit B'alpha). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in mammary gland adult (RPKM 92.3), subcutaneous fat pad adult (RPKM 91.4) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ppp2r5a in Genome Data Viewer
    Location:
    1 H6; 1 96.28 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (191084178..191129238, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (191351981..191397041, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene neuron derived neurotrophic factor Neighboring gene STARR-positive B cell enhancer ABC_E7787 Neighboring gene proton activated chloride channel 1 Neighboring gene STARR-positive B cell enhancer ABC_E10076 Neighboring gene RAB11B, member RAS oncogene family, pseudogene 1 Neighboring gene STARR-positive B cell enhancer ABC_E7788 Neighboring gene STARR-positive B cell enhancer ABC_E177 Neighboring gene STARR-positive B cell enhancer ABC_E998 Neighboring gene poly(A) binding protein, nuclear 1 pseudogene Neighboring gene predicted gene, 31987 Neighboring gene predicted gene, 32128

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Gene trapped (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC38798

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphoprotein phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphoprotein phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein phosphatase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of lipid kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of lipid kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of protein localization to plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in M band IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Z disc IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in Z disc ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein phosphatase type 2A complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein phosphatase type 2A complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein phosphatase type 2A complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_144880.4NP_659129.2  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform

      See identical proteins and their annotated locations for NP_659129.2

      Status: PROVISIONAL

      Source sequence(s)
      AC115896, AC124664
      Consensus CDS
      CCDS15620.1
      UniProtKB/Swiss-Prot
      Q6PD03, Q8R1U7
      UniProtKB/TrEMBL
      Q3ULN8
      Related
      ENSMUSP00000070726.4, ENSMUST00000067976.9
      Conserved Domains (2) summary
      PLN00122
      Location:351466
      PLN00122; serine/threonine protein phosphatase 2A; Provisional
      pfam01603
      Location:64461
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      191084178..191129238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)