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    DFP4 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856341, updated on 22-Aug-2024

    Summary

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    Official Symbol
    DFP4
    Primary source
    FungiDB:YHL044W
    Locus tag
    YHL044W
    See related
    SGD:S000001036; AllianceGenome:SGD:S000001036; VEuPathDB:YHL044W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (13565..14272)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene seripauperin PAU13 Neighboring gene Pxp3p Neighboring gene Ecm34p Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential evolution of the Saccharomyces cerevisiae DUP240 paralogs and implication of recombination in phylogeny. Leh-Louis V, et al. Nucleic Acids Res, 2004. PMID 15087486, Free PMC Article
    2. Functional analysis of the Saccharomyces cerevisiae DUP240 multigene family reveals membrane-associated proteins that are not essential for cell viability. Poirey R, et al. Microbiology (Reading), 2002 Jul. PMID 12101299
    3. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. Johnston M, et al. Science, 1994 Sep 30. PMID 8091229
    4. A plasma-membrane E-MAP reveals links of the eisosome with sphingolipid metabolism and endosomal trafficking. Aguilar PS, et al. Nat Struct Mol Biol, 2010 Jul. PMID 20526336, Free PMC Article
    5. Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets. Shin JJ, et al. Dis Model Mech, 2016 Sep 1. PMID 27519690, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUP240 family protein
    NP_011819.1
    • Putative integral membrane protein; member of DUP240 gene family; green fluorescent protein (GFP)-fusion protein localizes to the plasma membrane in a punctate pattern

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      13565..14272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179124.1 → NP_011819.1  TPA: DUP240 family protein [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011819.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKS6, P38727, Q70D60, Q70DF5, Q70DF7, Q70DF9, Q70DG3, Q70DG4, Q70DG5, Q70DG6, Q70DG7
      UniProtKB/TrEMBL
      A6ZSK9, B5VJN4, C7GRT1, C8ZA21
      Conserved Domains (1) summary
      pfam00674
      Location:103 → 170
      DUP; DUP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38727.1

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