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    Defb45 defensin beta 45 [ Mus musculus (house mouse) ]

    Gene ID: 433490, updated on 17-Aug-2024

    Summary

    Official Symbol
    Defb45provided by MGI
    Official Full Name
    defensin beta 45provided by MGI
    Primary source
    MGI:MGI:3650541
    See related
    Ensembl:ENSMUSG00000062124 AllianceGenome:MGI:3650541
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Defb27
    Expression
    Restricted expression toward genital fat pad adult (RPKM 33.5) See more
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    Genomic context

    See Defb45 in Genome Data Viewer
    Location:
    2 H1; 2 75.41 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (152435111..152438405, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (152593191..152596485, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene defensin beta 21 Neighboring gene defensin beta 19 Neighboring gene defensin beta 36 Neighboring gene protein kish-A pseudogene Neighboring gene predicted gene, 31618

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037752.2NP_001032841.1  beta-defensin 27 precursor

      See identical proteins and their annotated locations for NP_001032841.1

      Status: VALIDATED

      Source sequence(s)
      AK005919
      Consensus CDS
      CCDS38278.1
      UniProtKB/TrEMBL
      Q3V490
      Related
      ENSMUSP00000105460.3, ENSMUST00000109834.3
      Conserved Domains (1) summary
      pfam13841
      Location:2352
      Defensin_beta_2; Beta defensin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      152435111..152438405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)