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    PER3P1 PER3 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 168741, updated on 17-Sep-2024

    Summary

    Official Symbol
    PER3P1provided by HGNC
    Official Full Name
    PER3 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:54525
    See related
    AllianceGenome:HGNC:54525
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PER4
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    Genomic context

    See PER3P1 in Genome Data Viewer
    Location:
    7p21.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (9634270..9635817)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (9764681..9766228)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (9673900..9675447)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 pseudogene 19 Neighboring gene MPRA-validated peak6368 silencer Neighboring gene VISTA enhancer hs799 Neighboring gene Sharpr-MPRA regulatory region 911 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:9393157-9393764 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:9394915-9395416 Neighboring gene NANOG hESC enhancer GRCh37_chr7:9497177-9497869 Neighboring gene MPRA-validated peak6371 silencer Neighboring gene uncharacterized LOC105375148 Neighboring gene uncharacterized LOC105375145 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 68 Neighboring gene CPAMD8 pseudogene 1

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Bipolar disorder with comorbid binge eating history: A genome-wide association study implicates APOB.
    EBI GWAS Catalog

    General gene information

    Other Names

    • period 3 pseudogene
    • period 4 pseudogene
    • period circadian clock 3 pseudogene
    • period circadian regulator 3 pseudogene
    • period homolog 3 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002790.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC096553

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      9634270..9635817
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      9764681..9766228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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