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    sigL RNA polymerase sigma-54 factor (sigma-L) [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 936362, updated on 10-Oct-2024

    Summary

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    Gene symbol
    sigL
    Gene description
    RNA polymerase sigma-54 factor (sigma-L)
    Locus tag
    BSU_34200
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU34200
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    Genomic context

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    Sequence:
    NC_000964.3 (3512498..3513808, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-lactate utilization global transcriptional regulator (GntR family) Neighboring gene L-lactate permease Neighboring gene hypothetical protein Neighboring gene pyruvyl transferase for matrix biofilm formation Neighboring gene putative aminotransferase involved in biofilm matrix formation

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic evidence that multiple proteases are involved in modulation of heat-induced activation of the sigma factor SigI in Bacillus subtilis. Liu TY, et al. FEMS Microbiol Lett, 2017 Apr 1. PMID 28333276
    2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. SigB appears to control sigI expression during heat stress via ClpC, ClpP and Spx
      Title: Genetic evidence that multiple proteases are involved in modulation of heat-induced activation of the sigma factor SigI in Bacillus subtilis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    RNA polymerase sigma-54 factor (sigma-L)
    NP_391300.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11274109, 12533460, 12634342, 16166551, 16585774; Product type r: regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      3512498..3513808 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_391300.1 RNA polymerase sigma-54 factor (sigma-L) [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_391300.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D4G1P6
      Conserved Domains (1) summary
      TIGR02395
      Location:9 → 433
      rpoN_sigma; RNA polymerase sigma-54 factor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24219.1

    Gene LinkOut

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    Research Materials