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    spsJ dTDP-glucose 4,6-dehydratase [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 937227, updated on 12-Feb-2021

    Summary

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    Gene symbol
    spsJ
    Gene description
    dTDP-glucose 4,6-dehydratase
    Locus tag
    BSU_37830
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU37830
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    Genomic context

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    Sequence:
    NC_000964.3 (3884292..3885239, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene biofilm protein, member of the processed secretome contributing to biofilm hydrophobicity Neighboring gene putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat) Neighboring gene putative dTDP-4-dehydrorhamnose reductase Neighboring gene glucose-1-phosphate thymidylyltransferase Neighboring gene putative glycosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    General protein information

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    Preferred Names
    dTDP-glucose 4,6-dehydratase
    NP_391662.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 22960854; Product type e: enzyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      3884292..3885239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_391662.1 dTDP-glucose 4,6-dehydratase [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_391662.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      TIGR01181
      Location:4 → 315
      dTDP_gluc_dehyt; dTDP-glucose 4,6-dehydratase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P39630.1

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    Other Literature Sources
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    Research Materials