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    xkdK phage PBSX; conserved hypothetical protein [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 939943, updated on 6-Oct-2023

    Summary

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    Gene symbol
    xkdK
    Gene description
    phage PBSX; conserved hypothetical protein
    Locus tag
    BSU_12650
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU12650
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    Genomic context

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    Sequence:
    NC_000964.3 (1332402..1333802)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    phage PBSX; conserved hypothetical protein
    NP_389147.2
    • Evidence 4: Unknown function but conserved in other organisms; Product type h: extrachromosomal origin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_389147.2 phage PBSX; conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_389147.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1L8R9
      Conserved Domains (3) summary
      pfam04984
      Location:205 → 351
      Phage_sheath_1; Phage tail sheath protein subtilisin-like domain
      pfam17481
      Location:102 → 177
      Phage_sheath_1N; Phage tail sheath protein beta-sandwich domain
      pfam17482
      Location:358 → 465
      Phage_sheath_1C; Phage tail sheath C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P54331.2

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases