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    ycnC putative transcriptional regulator (TetR/AcrR family) [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938270, updated on 6-Aug-2024

    Summary

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    Gene symbol
    ycnC
    Gene description
    putative transcriptional regulator (TetR/AcrR family)
    Locus tag
    BSU_03850
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU03850
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    Genomic context

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    Sequence:
    NC_000964.3 (437474..438352, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene petrobactin iron-siderophore ABC transporter (binding lipoprotein) Neighboring gene putative efflux transporter Neighboring gene NADPH-FMN oxidoreductase (nitroreductase) Neighboring gene putative AI-2 degrading enzyme

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative transcriptional regulator (TetR/AcrR family)
    NP_388267.2
    • Evidence 3: Putative function from multiple computational evidences; Product type r: regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      437474..438352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388267.2 putative transcriptional regulator (TetR/AcrR family) [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388267.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAJ0JDN1, D4G559
      Conserved Domains (2) summary
      COG1309
      Location:3 → 191
      AcrR; DNA-binding transcriptional regulator, AcrR family [Transcription]
      pfam00440
      Location:8 → 54
      TetR_N; Bacterial regulatory proteins, tetR family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P94423.2

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases