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    ycsD putative hydroxyacyl-(acyl carrier protein) dehydratase [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938260, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ycsD
    Gene description
    putative hydroxyacyl-(acyl carrier protein) dehydratase
    Locus tag
    BSU_04030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU04030
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    Genomic context

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    Sequence:
    NC_000964.3 (455346..455738)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene type I signal peptidase Neighboring gene putative hydrolase Neighboring gene hypothetical protein Neighboring gene 5-amino-6-ribitylamino-2,4(1H, 3H)-pyrimidinedione 5'-phosphate phosphatase / 5' nucleotidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative hydroxyacyl-(acyl carrier protein) dehydratase
    NP_388285.2
    • Evidence 3: Putative function from multiple computational evidences; PubMedId: 12682299, 16291680, 22720735; Product type e: enzyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388285.2 putative hydroxyacyl-(acyl carrier protein) dehydratase [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388285.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D4G578
      Conserved Domains (1) summary
      cd01288
      Location:6 → 128
      FabZ; FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42961.2

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    Other Literature Sources
    Molecular Biology Databases