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    ydgH putative membrane component [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938043, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ydgH
    Gene description
    putative membrane component
    Locus tag
    BSU_05650
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU05650
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    Genomic context

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    Sequence:
    NC_000964.3 (609388..612045)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative amino acid permease Neighboring gene nuclease inhibitor Neighboring gene putative transcriptional regulator (MarR family) Neighboring gene nitroreductase of unidentified specificity (reduces 5-(aziridin-1-yl)-2,4-dinitrobenzamide prodrug) Neighboring gene putative transcriptional regulator (MarR family)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative membrane component
    NP_388446.1
    • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15941986; Product type m: membrane component

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388446.1 putative membrane component [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388446.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1KP15
      Conserved Domains (1) summary
      COG2409
      Location:1 → 885
      YdfJ; Uncharacterized membrane protein YdfJ, MMPL/SSD domain [Function unknown]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P96706.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases