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    ydiF putative energy-sensing inhibitor of translation [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938013, updated on 6-Oct-2023

    Summary

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    Gene symbol
    ydiF
    Gene description
    putative energy-sensing inhibitor of translation
    Locus tag
    BSU_05950
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU05950
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    Genomic context

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    Sequence:
    NC_000964.3 (644528..646456, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene tRNA(NNU) t(6)A37 threonylcarbamoyladenosine modification; ADP binding protein Neighboring gene tRNA(NNU) t(6)A37 threonylcarbamoyladenosine modification; protease involved in TsaD function Neighboring gene ribosomal protein S18 alanine N-acetyltransferase Neighboring gene tRNA(NNU) t(6)A37 threonylcarbamoyladenosine modification; glycation binding protein Neighboring gene molybdenum cofactor biosynthesis protein C Neighboring gene transcription repressor of cydABCD and yjlC-ndh expression Neighboring gene component of the twin-arginine pre-protein translocation pathway

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative energy-sensing inhibitor of translation
    NP_388476.2
    • Evidence 3: Putative function from multiple computational evidences; PubMedId: 11916677, 16109936, 24389466; Product type r: regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      644528..646456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388476.2 putative energy-sensing inhibitor of translation [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388476.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0D1KNY7
      Conserved Domains (2) summary
      COG0488
      Location:1 → 536
      Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
      pfam16326
      Location:574 → 638
      ABC_tran_CTD; ABC transporter C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O05519.2

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases