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    ntdR transcriptional regulator of the ntd operon (NtdR-NTD) (recent HGT island) [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 936344, updated on 10-Oct-2024

    Summary

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    Gene symbol
    ntdR
    Gene description
    transcriptional regulator of the ntd operon (NtdR-NTD) (recent HGT island)
    Locus tag
    BSU_10560
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU10560
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    Genomic context

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    Sequence:
    NC_000964.3 (1129715..1130704)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene biosynthesis of neotrehalosadiamine (3,3'-diamino-3,3'-dideoxy-alpha,beta-trehalose), glucose-6-P 3-dehydrogenase; kanosamine biosynthesis (recent HGT island) Neighboring gene biosynthesis of neotrehalosadiamine (3,3'-diamino-3,3'-dideoxy-alpha,beta-trehalose);kanosamine-6-phosphate phosphatase (recent HGT island) Neighboring gene biosynthesis of neotrehalosadiamine (3,3'-diamino-3,3'-dideoxy-alpha,beta-trehalose);3-oxo-glucose-6-phosphate:glutamate aminotransferase; kanosamine aminotransferase (recent HGT island) Neighboring gene putative integral inner membrane protein (recent HGT island) Neighboring gene putative permease (recent HGT island)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcriptional regulator of the ntd operon (NtdR-NTD) (recent HGT island)
    NP_388937.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 14612444, 17056753; Product type r: regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_388937.1 transcriptional regulator of the ntd operon (NtdR-NTD) (recent HGT island) [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_388937.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAP2PXG3
      Conserved Domains (1) summary
      COG1609
      Location:2 → 329
      PurR; DNA-binding transcriptional regulator, LacI/PurR family [Transcription]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O07567.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases