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    yobF hypothetical protein [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 939609, updated on 12-Feb-2021

    Summary

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    Gene symbol
    yobF
    Gene description
    hypothetical protein
    Locus tag
    BSU_18890
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU18890
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    Genomic context

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    Sequence:
    NC_000964.3 (2058715..2059638, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein; putative defective prophage 6 Neighboring gene putative SOS response associated phage protein; putative defective prophage 6 Neighboring gene hypothetical protein; putative defective prophage 6 Neighboring gene putative phage protein; putative defective prophage 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
    4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hypothetical protein
    NP_389770.1
    • Evidence 4: Unknown function but conserved in other organisms

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      2058715..2059638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_389770.1 conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_389770.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      cl00296
      Location:15 → 155
      Peptidase_C39_like; Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O34780.1

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials