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    tapA lipoprotein for biofilm formation [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 938532, updated on 21-Aug-2021

    Summary

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    Gene symbol
    tapA
    Gene description
    lipoprotein for biofilm formation
    Locus tag
    BSU_24640
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU24640
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    Genomic context

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    Sequence:
    NC_000964.3 (2554486..2555247, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene master regulator of biofilm formation Neighboring gene major biofilm matrix component Neighboring gene type I signal peptidase Neighboring gene hypothetical protein Neighboring gene factor involved in sporulation

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture. Earl C, et al. Mol Microbiol, 2020 Dec. PMID 32491277
    2. An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms. Romero D, et al. Mol Microbiol, 2011 Jun. PMID 21477127, Free PMC Article
    3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
    4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
    5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture.
      Title: The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture.
    2. TapA (YqxM) is essential for the proper anchoring and assembly of theTasA amyloid fibres.
      Title: An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lipoprotein for biofilm formation
    NP_390344.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10464223, 10559173, 14707086, 16430695, 17554552, 21477127, 24488317, 26441856, 26819068, 27655338; Product type lp : lipoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      2554486..2555247 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_390344.1 lipoprotein for biofilm formation [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_390344.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      TIGR04087
      Location:3 → 193
      YqxM_for_SipW; YqxM protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40949.2

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    Research Materials