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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052822.1 RefSeqGene
- Range
-
5020..34425
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_1214
mRNA and Protein(s)
-
NM_001012339.3 → NP_001012339.2 dnaJ homolog subfamily C member 21 isoform 2
See identical proteins and their annotated locations for NP_001012339.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, as compared to variant 1. The encoded isoform (2) lacks an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AC008795, AC026801, AY258422, BC065745
- Consensus CDS
-
CCDS34144.1
- UniProtKB/Swiss-Prot
- Q3B7J9, Q5F1R6, Q6P086, Q6ZS43, Q86VC6
- Related
- ENSP00000497410.1, ENST00000648817.1
- Conserved Domains (4) summary
-
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00226
Location:3 → 66
- DnaJ; DnaJ domain
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
- pfam13892
Location:181 → 243
- DBINO; DNA-binding domain
-
NM_001348420.2 → NP_001335349.1 dnaJ homolog subfamily C member 21 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 3, which is shorter than isoform 1.
- Source sequence(s)
-
AC008795, AC026801, AY258422, BC065745, BC107577
- Consensus CDS
-
CCDS87294.1
- UniProtKB/Swiss-Prot
-
Q5F1R6
- Related
- ENSP00000496545.1, ENST00000642851.1
- Conserved Domains (4) summary
-
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
- cl26511
Location:167 → 381
- Neuromodulin_N; Gap junction protein N-terminal region
- cl28246
Location:2 → 79
- DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
-
NM_194283.4 → NP_919259.3 dnaJ homolog subfamily C member 21 isoform 1
See identical proteins and their annotated locations for NP_919259.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC008795, AC026801, AK127749, BC050472, BC065745, BX648765
- Consensus CDS
-
CCDS3907.2
- UniProtKB/Swiss-Prot
-
Q5F1R6
- Related
- ENSP00000371451.2, ENST00000382021.2
- Conserved Domains (4) summary
-
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00226
Location:3 → 66
- DnaJ; DnaJ domain
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
- pfam13892
Location:181 → 243
- DBINO; DNA-binding domain