U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ESPNP espin pseudogene [ Homo sapiens (human) ]

    Gene ID: 284729, updated on 17-Sep-2024

    Summary

    Official Symbol
    ESPNPprovided by HGNC
    Official Full Name
    espin pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:23285
    See related
    AllianceGenome:HGNC:23285
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    dJ1182A14.1
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ESPNP in Genome Data Viewer
    Location:
    1p36.13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16691218..16720157, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (16406821..16435788, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (17017713..17046652, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene tRNA-Gly (CCC) 4-1 Neighboring gene EIF1AX pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17019619-17020445 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17020446-17021273 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:17021274-17022100 Neighboring gene uncharacterized LOC124903858 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17027493-17028178 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17034088-17034627 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17034628-17035166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17043745-17044298 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17044853-17045406 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:17045407-17045959 Neighboring gene tRNA-Val (CAC) 13-1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:17053781-17054392 Neighboring gene tRNA-Gly (CCC) 5-1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026567.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AL035288

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      16691218..16720157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791756.1 Reference GRCh38.p14 PATCHES

      Range
      816482..845437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      16406821..16435788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_007649.1: Suppressed sequence

      Description
      NG_007649.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.