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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053000.1 RefSeqGene
- Range
-
5498..189683
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001286431.2 → NP_001273360.1 DNA polymerase zeta catalytic subunit isoform b
See identical proteins and their annotated locations for NP_001273360.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in its 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
- Source sequence(s)
-
AF071798, AF179429, AK310949, AL080317, AL096744, AW450927, BP340028, HX785974
- Consensus CDS
-
CCDS69177.1
- UniProtKB/Swiss-Prot
-
O60673
- UniProtKB/TrEMBL
-
Q9UG47
- Conserved Domains (5) summary
-
- cd05778
Location:2216 → 2454
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2480 → 2928
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- pfam00136
Location:2480 → 2927
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:2964 → 3031
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:669 → 1055
- DUF4683; Domain of unknown function (DUF4683)
-
NM_001286432.2 → NP_001273361.1 DNA polymerase zeta catalytic subunit isoform b
See identical proteins and their annotated locations for NP_001273361.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in its 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
- Source sequence(s)
-
AF071798, AF078695, AF157476, AK310949, AL080317, AL096744, AW450927, BP340028, HX785974
- Consensus CDS
-
CCDS69177.1
- UniProtKB/Swiss-Prot
-
O60673
- UniProtKB/TrEMBL
-
Q9UG47
- Related
- ENSP00000402003.1, ENST00000435970.5
- Conserved Domains (5) summary
-
- cd05778
Location:2216 → 2454
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2480 → 2928
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- pfam00136
Location:2480 → 2927
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:2964 → 3031
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:669 → 1055
- DUF4683; Domain of unknown function (DUF4683)
-
NM_001372078.1 → NP_001359007.1 DNA polymerase zeta catalytic subunit isoform a
Status: REVIEWED
- Source sequence(s)
-
AL080317, AL136310, AL512325
- Consensus CDS
-
CCDS5091.2
- UniProtKB/Swiss-Prot
- O43214, O60673, Q5TC33
- Related
- ENSP00000357792.3, ENST00000368802.8
- Conserved Domains (5) summary
-
- cd05778
Location:2294 → 2532
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2558 → 3006
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- PTZ00166
Location:41 → 195
- PTZ00166; DNA polymerase delta catalytic subunit; Provisional
- pfam14260
Location:3042 → 3109
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:747 → 1133
- DUF4683; Domain of unknown function (DUF4683)
-
NM_002912.5 → NP_002903.3 DNA polymerase zeta catalytic subunit isoform a
See identical proteins and their annotated locations for NP_002903.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AF071798, AF157476, AK310949, AL080317, AL096744, AW450927, BP340028, HX785974
- Consensus CDS
-
CCDS5091.2
- UniProtKB/Swiss-Prot
- O43214, O60673, Q5TC33
- Related
- ENSP00000351697.3, ENST00000358835.7
- Conserved Domains (5) summary
-
- cd05778
Location:2294 → 2532
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2558 → 3006
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- PTZ00166
Location:41 → 195
- PTZ00166; DNA polymerase delta catalytic subunit; Provisional
- pfam14260
Location:3042 → 3109
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:747 → 1133
- DUF4683; Domain of unknown function (DUF4683)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
111299033..111483711 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011536029.4 → XP_011534331.1 DNA polymerase zeta catalytic subunit isoform X2
- Conserved Domains (6) summary
-
- cd05778
Location:2294 → 2558
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2584 → 3032
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- smart00486
Location:2316 → 2817
- POLBc; DNA polymerase type-B family
- pfam00136
Location:2584 → 3031
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:3068 → 3135
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:747 → 1133
- DUF4683; Domain of unknown function (DUF4683)
-
XM_011536030.4 → XP_011534332.1 DNA polymerase zeta catalytic subunit isoform X3
- Conserved Domains (5) summary
-
- cd05778
Location:2295 → 2533
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2559 → 3007
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- pfam00136
Location:2559 → 3006
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:3043 → 3110
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:748 → 1134
- DUF4683; Domain of unknown function (DUF4683)
-
XM_011536028.3 → XP_011534330.1 DNA polymerase zeta catalytic subunit isoform X1
- Conserved Domains (6) summary
-
- cd05778
Location:2295 → 2559
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2585 → 3033
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- smart00486
Location:2317 → 2818
- POLBc; DNA polymerase type-B family
- pfam00136
Location:2585 → 3032
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:3069 → 3136
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:748 → 1134
- DUF4683; Domain of unknown function (DUF4683)
-
XM_011536032.3 → XP_011534334.1 DNA polymerase zeta catalytic subunit isoform X4
See identical proteins and their annotated locations for XP_011534334.1
- Conserved Domains (6) summary
-
- cd05778
Location:2217 → 2481
- DNA_polB_zeta_exo; inactive DEDDy 3'-5' exonuclease domain of eukaryotic DNA polymerase zeta, a family-B DNA polymerase
- cd05534
Location:2507 → 2955
- POLBc_zeta; DNA polymerase type-B zeta subfamily catalytic domain. DNA polymerase (Pol) zeta is a member of the eukaryotic B-family of DNA polymerases and distantly related to DNA Pol delta. Pol zeta plays a major role in translesion replication and the production ...
- smart00486
Location:2239 → 2740
- POLBc; DNA polymerase type-B family
- pfam00136
Location:2507 → 2954
- DNA_pol_B; DNA polymerase family B
- pfam14260
Location:2991 → 3058
- zf-C4pol; C4-type zinc-finger of DNA polymerase delta
- pfam15735
Location:670 → 1056
- DUF4683; Domain of unknown function (DUF4683)
-
XM_047419216.1 → XP_047275172.1 DNA polymerase zeta catalytic subunit isoform X6
-
XM_047419215.1 → XP_047275171.1 DNA polymerase zeta catalytic subunit isoform X5
-
XM_047419219.1 → XP_047275175.1 DNA polymerase zeta catalytic subunit isoform X9
-
XM_047419217.1 → XP_047275173.1 DNA polymerase zeta catalytic subunit isoform X7
-
XM_047419218.1 → XP_047275174.1 DNA polymerase zeta catalytic subunit isoform X8
-
XM_047419220.1 → XP_047275176.1 DNA polymerase zeta catalytic subunit isoform X10
-
XM_011536036.4 → XP_011534338.1 DNA polymerase zeta catalytic subunit isoform X10
- Conserved Domains (1) summary
-
- pfam15735
Location:748 → 1134
- DUF4683; Domain of unknown function (DUF4683)
-
XM_017011155.3 → XP_016866644.1 DNA polymerase zeta catalytic subunit isoform X11
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
112482123..112666710 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054356150.1 → XP_054212125.1 DNA polymerase zeta catalytic subunit isoform X2
-
XM_054356151.1 → XP_054212126.1 DNA polymerase zeta catalytic subunit isoform X3
-
XM_054356149.1 → XP_054212124.1 DNA polymerase zeta catalytic subunit isoform X1
-
XM_054356152.1 → XP_054212127.1 DNA polymerase zeta catalytic subunit isoform X4
-
XM_054356154.1 → XP_054212129.1 DNA polymerase zeta catalytic subunit isoform X6
-
XM_054356153.1 → XP_054212128.1 DNA polymerase zeta catalytic subunit isoform X5
-
XM_054356157.1 → XP_054212132.1 DNA polymerase zeta catalytic subunit isoform X9
-
XM_054356155.1 → XP_054212130.1 DNA polymerase zeta catalytic subunit isoform X7
-
XM_054356156.1 → XP_054212131.1 DNA polymerase zeta catalytic subunit isoform X8
-
XM_054356158.1 → XP_054212133.1 DNA polymerase zeta catalytic subunit isoform X10
-
XM_054356159.1 → XP_054212134.1 DNA polymerase zeta catalytic subunit isoform X10
-
XM_054356160.1 → XP_054212135.1 DNA polymerase zeta catalytic subunit isoform X11