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    tcg1 single-stranded telomeric-binding protein Tgc1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541062, updated on 18-Sep-2024

    Summary

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    Official Symbol
    tcg1
    Official Full Name
    single-stranded telomeric-binding protein Tgc1
    Primary source
    PomBase:SPBC660.11
    Locus tag
    SPOM_SPBC660.11
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    mug187
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    Genomic context

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    See tcg1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (215099..216901)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein mug168 Neighboring gene mitochondrial translation elongation factor G Neighboring gene ergothioneine biosynthesis methyltransferase Egt2 Neighboring gene ncRNA Neighboring gene DNA replication factor A subunit Ssb1 Neighboring gene M phase inhibitor protein kinase Mik1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exposure of single-stranded telomeric DNA causes G2/M cell cycle arrest in Saccharomyces cerevisiae. Pang TL, et al. J Biol Chem, 2003 Mar 14. PMID 12519786
    2. The roles of fission yeast exonuclease 5 in nuclear and mitochondrial genome stability. Sparks JL, et al. DNA Repair (Amst), 2019 Nov. PMID 31563844, Free PMC Article
    3. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article
    4. A novel histone deacetylase complex in the control of transcription and genome stability. Zilio N, et al. Mol Cell Biol, 2014 Sep 15. PMID 25002536, Free PMC Article
    5. Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs. Lemieux C, et al. Nucleic Acids Res, 2009 Jun. PMID 19336419, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded telomeric DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in telomere maintenance TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in chromosome, telomeric repeat region IC
    Inferred by Curator
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nuclear speck IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus NAS
    Non-traceable Author Statement
    more info
    		  

    General protein information

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    Preferred Names
    single-stranded telomeric-binding protein Tgc1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      215099..216901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020997.3 → NP_595090.2  single-stranded telomeric-binding protein Tgc1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595090.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94430, Q9HEQ9
      Conserved Domains (2) summary
      smart00360
      Location:207 → 291
      RRM; RNA recognition motif
      cl17169
      Location:46 → 124
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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