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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_013325.3 RefSeqGene
- Range
-
239021..588669
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318067.1 → NP_001304996.1 mitogen-activated protein kinase 10 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) contains an alternate in-frame coding exon compared to variant 1. The resulting isoform (5) is the same length; however, contains a different 23 aa protein segment compared to isoform 1.
- Source sequence(s)
-
AC104059, AF052141, AK225974, BC035057
- Consensus CDS
-
CCDS87243.1
- UniProtKB/TrEMBL
- A0A286YF97, A0A286YFA6
- Related
- ENSP00000493344.1, ENST00000641718.1
- Conserved Domains (1) summary
-
- cd07850
Location:63 → 398
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001318068.1 → NP_001304997.1 mitogen-activated protein kinase 10 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains an alternate 5' terminal exon, lacks an internal exon and contains an alternate in-frame coding exon compared to variant 1. These differences result in translation initiation from an in-frame, downstream start codon, and an isoform (6) with a shorter N-terminus and containing a different 23 aa protein segment compared to isoform 1.
- Source sequence(s)
-
AC104059, AF052141, AK057723, BC035057, BC051731
- UniProtKB/TrEMBL
- B7Z1Z1, Q499Y8
- Conserved Domains (1) summary
-
- cl21453
Location:1 → 253
- PKc_like; Protein Kinases, catalytic domain
-
NM_001318069.2 → NP_001304998.1 mitogen-activated protein kinase 10 isoform 1x
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript and encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (1, also known as JNK3 alpha2) results from translation termination at the upstream UGA stop codon, while the longer isoform (1x) results from UGA stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the longer, C-terminally extended isoform (1x). As the UGA stop codon has been reported to specify several alternative amino acids (tryptophan, cysteine, arginine and serine), the location of the upstream UGA stop codon in the longer isoform is denoted by an 'X'.
- Source sequence(s)
-
AC104059, AF052141, AK057723, BC022492, BC035057
- Consensus CDS
-
CCDS93556.1
- UniProtKB/TrEMBL
- A0A286YFA6, F8W9R5
- Related
- ENSP00000414469.4, ENST00000449047.8
- Conserved Domains (2) summary
-
- smart00220
Location:64 → 359
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd07850
Location:63 → 398
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001351624.2 → NP_001338553.1 mitogen-activated protein kinase 10 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC104059, AF052141, AK307129, BC022492, BC035057
- Consensus CDS
-
CCDS3612.1
- UniProtKB/TrEMBL
-
A0A286YEN5
- Related
- ENSP00000493040.1, ENST00000642015.1
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001351625.3 → NP_001338554.1 mitogen-activated protein kinase 10 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC104059, AF052141, AK307129, BC022492, BC035057, CB069160
- Consensus CDS
-
CCDS87242.1
- UniProtKB/TrEMBL
- A0A286YFI3, D6RJF9
- Related
- ENSP00000352157.4, ENST00000359221.8
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_001363657.3 → NP_001350586.1 mitogen-activated protein kinase 10 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AC096953, AC104059, AC104827, AC108054
- Consensus CDS
-
CCDS87241.1
- UniProtKB/TrEMBL
- A0A286YEQ0, A0A286YFI3
- Related
- ENSP00000492922.1, ENST00000641208.1
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_002753.6 → NP_002744.1 mitogen-activated protein kinase 10 isoform 2
See identical proteins and their annotated locations for NP_002744.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate acceptor splice site at the 3' terminal exon, which causes a frameshift compared to variant 1. The resulting isoform (2, also know as JNK3 alpha1) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC096953, AC104059, AF052141, AK057723, U07620
- Consensus CDS
-
CCDS43247.1
- UniProtKB/TrEMBL
-
A0A286YFJ4
- Related
- ENSP00000493237.1, ENST00000641170.1
- Conserved Domains (1) summary
-
- cd07850
Location:63 → 398
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_138980.4 → NP_620446.1 mitogen-activated protein kinase 10 isoform 3
See identical proteins and their annotated locations for NP_620446.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate acceptor splice site in the 5' region, which results in translation initiation from an in-frame, downstream start codon compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC104059, AF052141, AK057723, BC022492, BC035057, DA192997
- Consensus CDS
-
CCDS3612.1
- UniProtKB/TrEMBL
-
A0A286YEN5
- Related
- ENSP00000491866.1, ENST00000638225.1
- Conserved Domains (1) summary
-
- cd07850
Location:25 → 360
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
-
NM_138982.4 → NP_620448.1 mitogen-activated protein kinase 10 isoform 1
See identical proteins and their annotated locations for NP_620448.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript and encodes two isoforms, which result from the use of alternative in-frame translation termination codons. The shorter isoform (1, also known as JNK3 alpha2) results from translation termination at the upstream UGA stop codon, while the longer isoform (1x) results from UGA stop codon readthrough to the downstream UGA termination codon. This RefSeq represents the shorter isoform (1).
- Source sequence(s)
-
AC104059, AF052141, AK057723, BC022492, BC035057
- Consensus CDS
-
CCDS34026.1
- UniProtKB/Swiss-Prot
- A6NFS3, A6NG28, B3KQ94, P53779, Q15707, Q49AP1
- UniProtKB/TrEMBL
-
A0A286YFA6
- Related
- ENSP00000493435.1, ENST00000641462.2
- Conserved Domains (1) summary
-
- cd07850
Location:63 → 398
- STKc_JNK; Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_138981.2: Suppressed sequence
- Description
- NM_138981.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.