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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001040272.6 → NP_001035362.3 ADAMTS-like protein 1 isoform 4 precursor
See identical proteins and their annotated locations for NP_001035362.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) encodes the longer isoform (4).
- Source sequence(s)
-
AF251058, AI750970, AL158150, AL591423, BC100790, BU626040, BX640951, CX758410, DA549329, DA598045
- Consensus CDS
-
CCDS47954.1
- UniProtKB/Swiss-Prot
- A6PVN1, A8K7E1, Q496M6, Q496M8, Q5T708, Q5VZT8, Q8N6G6, Q8NAI9, Q96RW4, Q9BXY3
- UniProtKB/TrEMBL
-
A0A7P0T9B9
- Related
- ENSP00000369921.4, ENST00000380548.9
- Conserved Domains (7) summary
-
- smart00408
Location:1300 → 1360
- IGc2; Immunoglobulin C-2 Type
- smart00209
Location:36 → 82
- TSP1; Thrombospondin type 1 repeats
- smart00410
Location:1286 → 1370
- IG_like; Immunoglobulin like
- pfam07679
Location:1395 → 1486
- I-set; Immunoglobulin I-set domain
- pfam08686
Location:1730 → 1759
- PLAC; PLAC (protease and lacunin) domain
- cl11960
Location:1197 → 1257
- Ig; Immunoglobulin domain
- cl15278
Location:735 → 788
- TSP_1; Thrombospondin type 1 domain
-
NM_052866.5 → NP_443098.3 ADAMTS-like protein 1 isoform 2 precursor
See identical proteins and their annotated locations for NP_443098.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has an alternate 3' exon, as compared to variant 4, resulting in immediate translation termination. Isoform 2 is truncated at the C-terminus, compared to isoform 4.
- Source sequence(s)
-
AF251058, AY358327, CX758410, DA598045
- Consensus CDS
-
CCDS6485.1
- UniProtKB/TrEMBL
-
A8K3Q2
- Related
- ENSP00000327887.7, ENST00000327883.11
- Conserved Domains (2) summary
-
- smart00209
Location:36 → 82
- TSP1; Thrombospondin type 1 repeats
- pfam05986
Location:205 → 279
- ADAM_spacer1; ADAM-TS Spacer 1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_139238.1: Suppressed sequence
- Description
- NM_139238.1: This RefSeq was permanently suppressed because currently there is not sufficient data to support this transcript.
-
NM_139264.1: Suppressed sequence
- Description
- NM_139264.1: This RefSeq was permanently suppressed because currently there is not sufficient data to support this transcript.