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    Gm5168 predicted gene 5168 [ Mus musculus (house mouse) ]

    Gene ID: 382275, updated on 2-Nov-2024

    Summary

    Official Symbol
    Gm5168provided by MGI
    Official Full Name
    predicted gene 5168provided by MGI
    Primary source
    MGI:MGI:3703318
    See related
    Ensembl:ENSMUSG00000079655 AllianceGenome:MGI:3703318
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG382275
    Summary
    Predicted to be involved in meiotic cell cycle and spermatid development. Predicted to be active in synaptonemal complex. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 3.2) See more
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    Genomic context

    See Gm5168 in Genome Data Viewer
    Location:
    X A2; X 18.01 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (25983498..26006341, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (26028198..26051041, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene X-linked lymphocyte-regulated protein PM1-like Neighboring gene predicted gene, 42169 Neighboring gene predicted gene, 42170 Neighboring gene STARR-seq mESC enhancer starr_46942 Neighboring gene predicted gene 2012

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Clone Names

    • MGC118210

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in meiotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in spermatid development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in synaptonemal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC382275

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025607.4NP_001020778.1  uncharacterized protein LOC382275

      See identical proteins and their annotated locations for NP_001020778.1

      Status: VALIDATED

      Source sequence(s)
      BX571729
      Consensus CDS
      CCDS40895.1
      UniProtKB/TrEMBL
      Q4KL04
      Related
      ENSMUSP00000086568.3, ENSMUST00000089165.9
      Conserved Domains (1) summary
      pfam04803
      Location:129208
      Cor1; Cor1/Xlr/Xmr conserved region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      25983498..26006341 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)