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    LOC101927247 uncharacterized LOC101927247 [ Homo sapiens (human) ]

    Gene ID: 101927247, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC101927247
    Gene description
    uncharacterized LOC101927247
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101927247 in Genome Data Viewer
    Location:
    1q42.12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (226187896..226197374)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (225375772..225385260)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904586 Neighboring gene ACBD3 antisense RNA 1 Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_5830 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226369626-226370126 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226370127-226370627 Neighboring gene Sharpr-MPRA regulatory region 9906 Neighboring gene ribosomal protein L34 pseudogene 7 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:226391149-226391650 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:226398175-226398896 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:226402654-226403619 Neighboring gene uncharacterized LOC124904528 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2647 Neighboring gene Sharpr-MPRA regulatory region 4175 Neighboring gene Mix paired-like homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      226187896..226197374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001738504.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      225375772..225385260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007071137.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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