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    KIF25-AS1 KIF25 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100505879, updated on 17-Sep-2024

    Summary

    Official Symbol
    KIF25-AS1provided by HGNC
    Official Full Name
    KIF25 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:20953
    See related
    Ensembl:ENSG00000229921 AllianceGenome:HGNC:20953
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C6orf54; HGC6.1.1; NCRNA00300
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See KIF25-AS1 in Genome Data Viewer
    Location:
    6q27
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (167994187..167997077, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (169332874..169335763, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (168394867..168397757, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene afadin, adherens junction formation factor Neighboring gene uncharacterized LOC107986673 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:168375775-168376684 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168378524-168379100 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:168379101-168379677 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:168380255-168380830 Neighboring gene MPRA-validated peak6321 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168390864-168391364 Neighboring gene uncharacterized LOC100128124 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:168407804-168409003 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:168412930-168413846 Neighboring gene kinesin family member 25 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:168426039-168426217 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:168430121-168430302 Neighboring gene uncharacterized LOC105378135

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • KIF25 antisense RNA 1 (non-protein coding)

    Clone Names

    • MGC138420, MGC177297

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_103750.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL589733
      Related
      ENST00000414364.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      167994187..167997077 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      169332874..169335763 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_014354.2: Suppressed sequence

      Description
      NM_014354.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.