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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001284388.2 → NP_001271317.1 nucleolar and coiled-body phosphoprotein 1 isoform 1
See identical proteins and their annotated locations for NP_001271317.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AK314363, AL520884, D21262, DA588285
- Consensus CDS
-
CCDS65926.1
- UniProtKB/TrEMBL
-
A0A0A0MRM9
- Related
- ENSP00000359024.5, ENST00000370007.5
- Conserved Domains (1) summary
-
- pfam05022
Location:634 → 700
- SRP40_C; SRP40, C-terminal domain
-
NM_001284389.2 → NP_001271318.1 nucleolar and coiled-body phosphoprotein 1 isoform 3
See identical proteins and their annotated locations for NP_001271318.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses two alternate in-frame splice sites in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 3), compared to isoform 1.
- Source sequence(s)
-
AL520884, BC001883, D21262, DA588285
- Consensus CDS
-
CCDS65925.1
- UniProtKB/TrEMBL
-
B2RAU8
- Related
- ENSP00000475080.1, ENST00000488254.6
- Conserved Domains (1) summary
-
- pfam05022
Location:625 → 691
- SRP40_C; SRP40, C-terminal domain
-
NM_004741.5 → NP_004732.2 nucleolar and coiled-body phosphoprotein 1 isoform 2
See identical proteins and their annotated locations for NP_004732.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AK314363, AL520884, BC006769
- Consensus CDS
-
CCDS7530.1
- UniProtKB/Swiss-Prot
- Q14978, Q15030, Q5VV70, Q9BUV3
- UniProtKB/TrEMBL
-
B2RAU8
- Related
- ENSP00000474710.2, ENST00000605788.6
- Conserved Domains (1) summary
-
- pfam05022
Location:624 → 690
- SRP40_C; SRP40, C-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
102152389..102163870
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005270273.3 → XP_005270330.1 nucleolar and coiled-body phosphoprotein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A0A0MRM9
- Conserved Domains (1) summary
-
- pfam05022
Location:635 → 701
- SRP40_C; SRP40, C-terminal domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
103037369..103048850
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054367144.1 → XP_054223119.1 nucleolar and coiled-body phosphoprotein 1 isoform X1