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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001105513.3 → NP_001098983.2  tetratricopeptide repeat protein 21A isoform 1
Status: VALIDATED
- Source sequence(s)
-
AA843452, AK093313, AK098528, AK302465, DC403032
- Consensus CDS
-
CCDS43068.2
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Related
- ENSP00000410882.1, ENST00000440121.1
- Conserved Domains (5) summary
-
- sd00006
Location:684 → 708
- TPR; TPR repeat [structural motif]
- pfam12895
Location:467 → 550
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1156 → 1217
- TPR_11; TPR repeat
- pfam13432
Location:684 → 747
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:851 → 918
- TPR_19; Tetratricopeptide repeat
-
NM_001366899.1 → NP_001353828.1  tetratricopeptide repeat protein 21A isoform 3
Status: VALIDATED
- Source sequence(s)
-
HM005525
- UniProtKB/TrEMBL
- A0A0B4J1Y2, A0A140VJY5
- Conserved Domains (3) summary
-
- sd00006
Location:733 → 757
- TPR; TPR repeat [structural motif]
- cl26000
Location:1103 → 1233
- YciM; Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain [Cell wall/membrane/envelope biogenesis]
- cl26002
Location:322 → 1055
- TPR_11; TPR repeat
-
NM_001366900.1 → NP_001353829.1  tetratricopeptide repeat protein 21A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC092053, AC138124
- Consensus CDS
-
CCDS93247.1
- UniProtKB/TrEMBL
- A0A0B4J1Y2, A0A804HK20
- Related
- ENSP00000507739.1, ENST00000683103.1
-
NM_145755.3 → NP_665698.2  tetratricopeptide repeat protein 21A isoform 2
See identical proteins and their annotated locations for NP_665698.2
Status: VALIDATED
- Source sequence(s)
-
AA843452, AJ487015, AK093313, AK098528, DB094952, DC403032
- Consensus CDS
-
CCDS46800.1
- UniProtKB/Swiss-Prot
- A1L388, B4DYF6, B4DYJ3, D3YTE7, D4PHA5, Q6P5W8, Q8N7G5, Q8NA02, Q8NDW8
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Related
- ENSP00000398211.2, ENST00000431162.6
- Conserved Domains (5) summary
-
- sd00006
Location:732 → 756
- TPR; TPR repeat [structural motif]
- pfam12895
Location:518 → 598
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1204 → 1265
- TPR_11; TPR repeat
- pfam13432
Location:732 → 795
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:899 → 966
- TPR_19; Tetratricopeptide repeat
RNA
-
NR_159494.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC092053, AC138124, BC129948
- Related
-
ENST00000430597.6
-
NR_159495.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC092053, AC138124
-
NR_159496.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC092053, AC138124
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
39107680..39138900
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047447647.1 → XP_047303603.1  tetratricopeptide repeat protein 21A isoform X3
-
XM_005264921.6 → XP_005264978.1  tetratricopeptide repeat protein 21A isoform X1
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:725 → 749
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1211 → 1272
- TPR_11; TPR repeat
- pfam13432
Location:725 → 788
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:892 → 959
- TPR_19; Tetratricopeptide repeat
-
XM_005264922.6 → XP_005264979.1  tetratricopeptide repeat protein 21A isoform X2
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:725 → 749
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1206 → 1267
- TPR_11; TPR repeat
- pfam13432
Location:725 → 788
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:892 → 959
- TPR_19; Tetratricopeptide repeat
-
XM_006713011.5 → XP_006713074.1  tetratricopeptide repeat protein 21A isoform X4
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:725 → 749
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1202 → 1263
- TPR_11; TPR repeat
- pfam13432
Location:725 → 788
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:892 → 959
- TPR_19; Tetratricopeptide repeat
-
XM_005264924.6 → XP_005264981.1  tetratricopeptide repeat protein 21A isoform X6
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (4) summary
-
- sd00006
Location:497 → 522
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1174 → 1235
- TPR_11; TPR repeat
- pfam14559
Location:855 → 922
- TPR_19; Tetratricopeptide repeat
-
XM_047447648.1 → XP_047303604.1  tetratricopeptide repeat protein 21A isoform X8
-
XM_047447650.1 → XP_047303606.1  tetratricopeptide repeat protein 21A isoform X10
-
XM_005264926.6 → XP_005264983.1  tetratricopeptide repeat protein 21A isoform X11
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (4) summary
-
- sd00006
Location:497 → 522
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1093 → 1154
- TPR_11; TPR repeat
- pfam14559
Location:774 → 841
- TPR_19; Tetratricopeptide repeat
-
XM_047447651.1 → XP_047303607.1  tetratricopeptide repeat protein 21A isoform X12
-
XM_017005843.3 → XP_016861332.1  tetratricopeptide repeat protein 21A isoform X13
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
-
XM_011533447.4 → XP_011531749.1  tetratricopeptide repeat protein 21A isoform X5
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:692 → 716
- TPR; TPR repeat [structural motif]
- pfam12895
Location:475 → 558
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1178 → 1239
- TPR_11; TPR repeat
- pfam13432
Location:692 → 755
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:859 → 926
- TPR_19; Tetratricopeptide repeat
-
XM_047447649.1 → XP_047303605.1  tetratricopeptide repeat protein 21A isoform X9
-
XM_005264925.6 → XP_005264982.1  tetratricopeptide repeat protein 21A isoform X7
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:684 → 708
- TPR; TPR repeat [structural motif]
- pfam12895
Location:467 → 550
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1170 → 1231
- TPR_11; TPR repeat
- pfam13432
Location:684 → 747
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:851 → 918
- TPR_19; Tetratricopeptide repeat
-
XM_047447652.1 → XP_047303608.1  tetratricopeptide repeat protein 21A isoform X14
-
XM_047447653.1 → XP_047303609.1  tetratricopeptide repeat protein 21A isoform X15
-
XM_047447654.1 → XP_047303610.1  tetratricopeptide repeat protein 21A isoform X17
-
XM_024453382.2 → XP_024309150.1  tetratricopeptide repeat protein 21A isoform X18
- Conserved Domains (2) summary
-
- sd00006
Location:725 → 749
- TPR; TPR repeat [structural motif]
- cl26002
Location:5 → 775
- TPR_11; TPR repeat
-
XM_011533449.3 → XP_011531751.1  tetratricopeptide repeat protein 21A isoform X19
- Conserved Domains (3) summary
-
- COG0457
Location:28 → 246
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:497 → 522
- TPR; TPR repeat [structural motif]
- pfam12895
Location:508 → 591
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
-
XM_005264927.5 → XP_005264984.1  tetratricopeptide repeat protein 21A isoform X16
- UniProtKB/TrEMBL
-
A0A0B4J1Y2
- Conserved Domains (5) summary
-
- sd00006
Location:538 → 562
- TPR; TPR repeat [structural motif]
- pfam12895
Location:321 → 404
- ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
- pfam13414
Location:1024 → 1085
- TPR_11; TPR repeat
- pfam13432
Location:538 → 601
- TPR_16; Tetratricopeptide repeat
- pfam14559
Location:705 → 772
- TPR_19; Tetratricopeptide repeat
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1Â Alternate T2T-CHM13v2.0
- Range
-
39119844..39151076
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345586.1 → XP_054201561.1  tetratricopeptide repeat protein 21A isoform X3
-
XM_054345584.1 → XP_054201559.1  tetratricopeptide repeat protein 21A isoform X1
-
XM_054345585.1 → XP_054201560.1  tetratricopeptide repeat protein 21A isoform X2
-
XM_054345587.1 → XP_054201562.1  tetratricopeptide repeat protein 21A isoform X4
-
XM_054345589.1 → XP_054201564.1  tetratricopeptide repeat protein 21A isoform X6
-
XM_054345591.1 → XP_054201566.1  tetratricopeptide repeat protein 21A isoform X8
-
XM_054345593.1 → XP_054201568.1  tetratricopeptide repeat protein 21A isoform X10
-
XM_054345594.1 → XP_054201569.1  tetratricopeptide repeat protein 21A isoform X11
-
XM_054345595.1 → XP_054201570.1  tetratricopeptide repeat protein 21A isoform X12
-
XM_054345596.1 → XP_054201571.1  tetratricopeptide repeat protein 21A isoform X13
-
XM_054345588.1 → XP_054201563.1  tetratricopeptide repeat protein 21A isoform X5
-
XM_054345592.1 → XP_054201567.1  tetratricopeptide repeat protein 21A isoform X9
-
XM_054345590.1 → XP_054201565.1  tetratricopeptide repeat protein 21A isoform X7
-
XM_054345597.1 → XP_054201572.1  tetratricopeptide repeat protein 21A isoform X14
-
XM_054345598.1 → XP_054201573.1  tetratricopeptide repeat protein 21A isoform X15
-
XM_054345600.1 → XP_054201575.1  tetratricopeptide repeat protein 21A isoform X17
-
XM_054345601.1 → XP_054201576.1  tetratricopeptide repeat protein 21A isoform X18
-
XM_054345602.1 → XP_054201577.1  tetratricopeptide repeat protein 21A isoform X19
-
XM_054345599.1 → XP_054201574.1  tetratricopeptide repeat protein 21A isoform X16