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    LOC100507384 uncharacterized LOC100507384 [ Homo sapiens (human) ]

    Gene ID: 100507384, updated on 22-Oct-2024

    Summary

    Gene symbol
    LOC100507384
    Gene description
    uncharacterized LOC100507384
    See related
    Ensembl:ENSG00000254519
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 17.5) See more
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    Genomic context

    See LOC100507384 in Genome Data Viewer
    Location:
    11p11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (45722308..45724555)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (45878009..45880256)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (45743858..45746106)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902666 Neighboring gene carbohydrate sulfotransferase 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45682479-45682980 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45684361-45685014 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45716940-45717796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45719981-45720482 Neighboring gene microRNA 7154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45720483-45720982 Neighboring gene uncharacterized LOC124902667 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45764980-45765546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45765683-45766184 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45766185-45766684 Neighboring gene long intergenic non-protein coding RNA 2690

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_047569.3 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC044839, DB021716, KF573654
      Related
      ENST00000614989.3

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      45722308..45724555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      45878009..45880256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)