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    LINC02877 long intergenic non-protein coding RNA 2877 [ Homo sapiens (human) ]

    Gene ID: 152118, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02877provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2877provided by HGNC
    Primary source
    HGNC:HGNC:37259
    See related
    Ensembl:ENSG00000237787 AllianceGenome:HGNC:37259
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C3orf79
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Genomic context

    See LINC02877 in Genome Data Viewer
    Location:
    3q25.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (153484495..153502697)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (156255174..156273395)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (153202284..153220486)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2006 Neighboring gene long intergenic non-protein coding RNA 2083 Neighboring gene RNA, U6 small nuclear 901, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20718 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:153514677-153515178 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:153598703-153599902 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20719 Neighboring gene U8 small nucleolar RNA Neighboring gene ribosomal protein L21 pseudogene 42

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_160966.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC078788
      Related
      ENST00000623038.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      153484495..153502697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      156255174..156273395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)