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    FAM238A family with sequence similarity 238 member A [ Homo sapiens (human) ]

    Gene ID: 645528, updated on 17-Sep-2024

    Summary

    Official Symbol
    FAM238Aprovided by HGNC
    Official Full Name
    family with sequence similarity 238 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:17776
    See related
    Ensembl:ENSG00000290444 AllianceGenome:HGNC:17776
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C10orf50; LINC00264; NCRNA00264; bA128B16.2
    Expression
    Restricted expression toward testis (RPKM 7.7) See more
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    Genomic context

    See FAM238A in Genome Data Viewer
    Location:
    10p12.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (26589865..26594324)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (26614600..26619068)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (26878794..26883253)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein Neighboring gene RNA, 5S ribosomal pseudogene 307 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2236 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3169 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26868178-26868678 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26871445-26871944 Neighboring gene long intergenic non-protein coding RNA 3028 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26877727-26878226 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:26882505-26883048 Neighboring gene uncharacterized LOC102724202 Neighboring gene uncharacterized LOC105376461

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Other Names

    • family with sequence similarity 236 member A (non-protein coding)
    • family with sequence similarity 238 member A (non-protein coding)
    • long intergenic non-protein coding RNA 264

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026793.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL160287, BC038537
      Related
      ENST00000412114.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      26589865..26594324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      26614600..26619068
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)