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    CIMIP6 ciliary microtubule inner protein 6 [ Homo sapiens (human) ]

    Gene ID: 129852, updated on 17-Sep-2024

    Summary

    Official Symbol
    CIMIP6provided by HGNC
    Official Full Name
    ciliary microtubule inner protein 6provided by HGNC
    Primary source
    HGNC:HGNC:26861
    See related
    Ensembl:ENSG00000177994 AllianceGenome:HGNC:26861
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C2orf73
    Expression
    Restricted expression toward testis (RPKM 9.6) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CIMIP6 in Genome Data Viewer
    Location:
    2p16.2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (54330884..54384193)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (54327057..54355776)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (54558021..54588718)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene acylphosphatase 2 Neighboring gene RNA, U7 small nuclear 172 pseudogene Neighboring gene uncharacterized LOC105374610 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15758 Neighboring gene TSPY like 6 Neighboring gene uncharacterized LOC102724072 Neighboring gene NANOG hESC enhancer GRCh37_chr2:54711535-54712045 Neighboring gene NANOG hESC enhancer GRCh37_chr2:54724305-54724844 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:54725305-54725489 Neighboring gene C9orf85 pseudogene 1 Neighboring gene spectrin beta, non-erythrocytic 1 Neighboring gene SPTBN1 antisense RNA 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    uncharacterized protein C2orf73

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100396.2NP_001093866.1  uncharacterized protein C2orf73 isoform 1

      See identical proteins and their annotated locations for NP_001093866.1

      Status: VALIDATED

      Source sequence(s)
      AC108929, AK097617, BC031669, BC126246
      Consensus CDS
      CCDS46285.1
      UniProtKB/Swiss-Prot
      A0AV79, A0AV81, Q8N5S3, Q8N7V4
      Related
      ENSP00000381631.2, ENST00000398634.7
      Conserved Domains (1) summary
      pfam15667
      Location:45281
      GDWWSH; Protein of unknown function with motif GDWWSH
    2. NM_001369401.1NP_001356330.1  uncharacterized protein C2orf73 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC108929
      UniProtKB/TrEMBL
      B7ZM12, E7ENW1
      Related
      ENSP00000389570.1, ENST00000447328.5
      Conserved Domains (1) summary
      pfam15667
      Location:1224
      GDWWSH; Protein of unknown function with motif GDWWSH
    3. NM_001369403.1NP_001356332.1  uncharacterized protein C2orf73 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC108929
      Conserved Domains (1) summary
      pfam15667
      Location:1161
      GDWWSH; Protein of unknown function with motif GDWWSH

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      54330884..54384193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047443325.1XP_047299281.1  uncharacterized protein C2orf73 isoform X1

    2. XM_024452687.2XP_024308455.1  uncharacterized protein C2orf73 isoform X1

      Conserved Domains (1) summary
      pfam15667
      Location:103340
      GDWWSH; Protein of unknown function with motif GDWWSH

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      54327057..54355776
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054340494.1XP_054196469.1  uncharacterized protein C2orf73 isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_173486.1: Suppressed sequence

      Description
      NM_173486.1: This RefSeq was permanently suppressed because it contains the wrong CDS, and the correct CDS would make it a nonsense-mediated mRNA decay (NMD) candidate.