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    KCNMB2-AS1 KCNMB2 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 104797538, updated on 17-Sep-2024

    Summary

    Official Symbol
    KCNMB2-AS1provided by HGNC
    Official Full Name
    KCNMB2 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:51409
    See related
    AllianceGenome:HGNC:51409
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See KCNMB2-AS1 in Genome Data Viewer
    Location:
    3q26.32
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (178525467..178860405, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (181328698..181664243, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (178243255..178578193, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1014 Neighboring gene RNA, 5S ribosomal pseudogene 148 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20849 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20850 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20851 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20852 Neighboring gene peptidylprolyl isomerase A pseudogene 75 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14907 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20853 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20854 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20855 Neighboring gene MPRA-validated peak4947 silencer Neighboring gene uncharacterized LOC124909461 Neighboring gene NANOG hESC enhancer GRCh37_chr3:178545086-178545618 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:178578153-178578979 Neighboring gene uncharacterized LOC124906307 Neighboring gene MPRA-validated peak4949 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20856 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20857 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14908 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14909 Neighboring gene zinc finger matrin-type 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_126560.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AC024220, AC117457
    2. NR_126561.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks three exons, contains an alternate exon, and uses an alternate splice site at an internal exon, resulting in a shorter transcript than variant 1.
      Source sequence(s)
      AC024220, AC117457

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      178525467..178860405 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      181328698..181664243 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)