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    FAM187B family with sequence similarity 187 member B [ Homo sapiens (human) ]

    Gene ID: 148109, updated on 28-Oct-2024

    Summary

    Official Symbol
    FAM187Bprovided by HGNC
    Official Full Name
    family with sequence similarity 187 member Bprovided by HGNC
    Primary source
    HGNC:HGNC:26366
    See related
    Ensembl:ENSG00000177558 AllianceGenome:HGNC:26366
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TMEM162
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Restricted expression toward testis (RPKM 18.6) See more
    Orthologs
    NEW
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    Genomic context

    See FAM187B in Genome Data Viewer
    Location:
    19q13.12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (35224800..35228739, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (37769454..37773380, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (35715703..35719642, complement)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14457 Neighboring gene FXYD domain containing ion transport regulator 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:35666754-35666910 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr19:35693985-35694502 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35694503-35695020 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35695021-35695538 Neighboring gene uncharacterized LOC105372379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14458 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35702580-35703391 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14459 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14460 Neighboring gene family with sequence similarity 187, member B pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14461 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35738792-35739594 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:35739595-35740396 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:35748323-35748823 Neighboring gene uncharacterized LOC105372380 Neighboring gene lipolysis stimulated lipoprotein receptor

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    protein FAM187B
    Names
    transmembrane protein 162

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_152481.2NP_689694.1  protein FAM187B precursor

      See identical proteins and their annotated locations for NP_689694.1

      Status: VALIDATED

      Source sequence(s)
      AC002128
      Consensus CDS
      CCDS12448.1
      UniProtKB/Swiss-Prot
      Q17R55, Q8N7G6
      Related
      ENSP00000323355.3, ENST00000324675.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      35224800..35228739 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      37769454..37773380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)