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    ARGFXP2 arginine-fifty homeobox pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 503640, updated on 17-Sep-2024

    Summary

    Official Symbol
    ARGFXP2provided by HGNC
    Official Full Name
    arginine-fifty homeobox pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:23977
    See related
    AllianceGenome:HGNC:23977
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the ARGFX homeobox gene family. [provided by RefSeq, Jul 2008]
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    Genomic context

    See ARGFXP2 in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (32150357..32151571, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (33096126..33097340, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (30477376..30478590, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:30437320-30438144 Neighboring gene WD repeat domain 45B pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12023 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12024 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12025 Neighboring gene uncharacterized LOC105371730 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12026 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8418 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8419 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:30483220-30483763 Neighboring gene ras homolog family member T1 Neighboring gene NANOG hESC enhancer GRCh37_chr17:30507190-30507714 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:30554572-30555278 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:30555279-30555983 Neighboring gene ubiquitin like 5 pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 9359 Neighboring gene uncharacterized LOC124903979

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002222.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC116407

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      32150357..32151571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      33096126..33097340 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)