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    PDPR2P pyruvate dehydrogenase phosphatase regulatory subunit 2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 283922, updated on 22-Oct-2024

    Summary

    Official Symbol
    PDPR2Pprovided by HGNC
    Official Full Name
    pyruvate dehydrogenase phosphatase regulatory subunit 2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:27556
    See related
    Ensembl:ENSG00000290890 AllianceGenome:HGNC:27556
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in testis (RPKM 5.4), spleen (RPKM 5.2) and 25 other tissues See more
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    Genomic context

    See PDPR2P in Genome Data Viewer
    Location:
    16q23.1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (74332406..74368255, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (80150194..80186034, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (74366304..74402153, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancers GRCh37_chr16:74329945-74330836 and GRCh37_chr16:74330837-74331726 Neighboring gene proteasome 26S subunit, non-ATPase 7 Neighboring gene ribosomal protein L21 pseudogene 118 Neighboring gene prostate cancer associated HIP1 interacting lncRNA Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:74390671-74391172 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:74402112-74402363 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11107 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:74414879-74415096 Neighboring gene nuclear pore complex interacting protein family member B15 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:74431311-74432152 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:74433981-74434480 Neighboring gene uncharacterized LOC105376772

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026950.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK096768, BC037579, DA388660
      Related
      ENST00000723004.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      74332406..74368255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      80150194..80186034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)