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    RRN6 Rrn6p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852269, updated on 2-Nov-2024

    Summary

    Official Symbol
    RRN6
    Official Full Name
    Rrn6p
    Primary source
    SGD:S000000110
    Locus tag
    YBL014C
    See related
    AllianceGenome:SGD:S000000110; FungiDB:YBL014C; VEuPathDB:YBL014C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables RNA polymerase I general transcription initiation factor binding activity and RNA polymerase I transcription regulatory region sequence-specific DNA binding activity. Involved in nucleolar large rRNA transcription by RNA polymerase I. Part of RNA polymerase I core factor complex. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See RRN6 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_001134.8 (199064..201748, complement)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene tRNA-Ile Neighboring gene tRNA-Gly Neighboring gene methionyl-tRNA formyltransferase Neighboring gene bifunctional glycerol-3-phosphate/glycerone-phosphate O-acyltransferase SCT1

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Component Evidence Code Pubs
    part_of RNA polymerase I core factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RNA polymerase I core factor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of RNA polymerase I core factor complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Rrn6p
    NP_009539.2
    • Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      199064..201748 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178254.2NP_009539.2  TPA: Rrn6p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009539.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VPY6, P32786
      UniProtKB/TrEMBL
      G2W8Z5
      Conserved Domains (1) summary
      pfam10214
      Location:175878
      Rrn6; RNA polymerase I-specific transcription-initiation factor