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    PAU21 seripauperin PAU21 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854576, updated on 2-Nov-2024

    Summary

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    Official Symbol
    PAU21
    Official Full Name
    seripauperin PAU21
    Primary source
    SGD:S000005921
    Locus tag
    YOR394W
    See related
    AllianceGenome:SGD:S000005921; FungiDB:YOR394W; VEuPathDB:YOR394W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Located in cytosol. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See PAU21 in Genome Data Viewer
    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (1082718..1083212)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene glutathione-independent methylglyoxalase family protein Neighboring gene phosphopyruvate hydratase ERR1 Neighboring gene uncharacterized protein Neighboring gene Y' element ATP-dependent helicase protein 1 copy 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres. Jethmalani Y, et al. Life Sci Alliance, 2021 Dec. PMID 34625508, Free PMC Article
    2. Functional analyses of PAU genes in Saccharomyces cerevisiae. Luo Z, et al. Microbiology (Reading), 2009 Dec. PMID 19762443
    3. Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Fisk DG, et al. Yeast, 2006 Sep. PMID 17001629, Free PMC Article
    4. The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Dujon B, et al. Nature, 1997 May 29. PMID 9169874
    5. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables structural constituent of cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in fungal-type cell wall organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    is_active_in fungal-type cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    seripauperin PAU21
    NP_015039.3
    • hypothetical protein; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cytosol; identical to Pau22p; encodes two proteins that are translated from 2 different start codons

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      1082718..1083212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183814.3 → NP_015039.3  TPA: seripauperin PAU21 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015039.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W386, P0CE86, P0CE87
      UniProtKB/TrEMBL
      A6ZVW2, B3LK46
      Conserved Domains (1) summary
      pfam00660
      Location:66 → 158
      SRP1_TIP1; Seripauperin and TIP1 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CE86.1
    P0CE87.1

    Gene LinkOut

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    Research Materials