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    CSPG4BP chondroitin sulfate proteoglycan family member 4B, pseudogene [ Homo sapiens (human) ]

    Gene ID: 727930, updated on 17-Sep-2024

    Summary

    Official Symbol
    CSPG4BPprovided by HGNC
    Official Full Name
    chondroitin sulfate proteoglycan family member 4B, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:51505
    See related
    Ensembl:ENSG00000232517 AllianceGenome:HGNC:51505
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See CSPG4BP in Genome Data Viewer
    Location:
    5q11.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (54810139..54872034, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (55637782..55699689, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (54105967..54167862, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr5:53813343-53813584 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:53814497-53815441 Neighboring gene sorting nexin 18 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:53935341-53935915 Neighboring gene long intergenic non-protein coding RNA 2998 Neighboring gene uncharacterized LOC105378969 Neighboring gene NFE2L2 motif-containing MPRA enhancer 222 Neighboring gene zinc finger protein 561-like Neighboring gene thiosulfate sulfurtransferase like domain containing 1 pseudogene Neighboring gene uncharacterized LOC124900976

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_028714.1 

      Range
      101..61996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      54810139..54872034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      55637782..55699689 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)