U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    APOOL apolipoprotein O like [ Homo sapiens (human) ]

    Gene ID: 139322, updated on 28-Oct-2024

    Summary

    Official Symbol
    APOOLprovided by HGNC
    Official Full Name
    apolipoprotein O likeprovided by HGNC
    Primary source
    HGNC:HGNC:24009
    See related
    Ensembl:ENSG00000155008 MIM:300955; AllianceGenome:HGNC:24009
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Mic27; CXorf33; FAM121A; MICOS27; UNQ8193
    Summary
    This gene encodes a protein which contains an apolipoprotein O superfamily domain. This domain is found on proteins in circulating lipoprotein complexes. [provided by RefSeq, Sep 2011]
    Expression
    Ubiquitous expression in brain (RPKM 7.7), thyroid (RPKM 6.2) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See APOOL in Genome Data Viewer
    Location:
    Xq21.1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (85003877..85093315)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (83432345..83522274)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (84258883..84348321)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene testis expressed 16, pseudogene Neighboring gene SET pseudogene 4 Neighboring gene ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene) Neighboring gene spermidine/spermine N1-acetyl transferase like 1 Neighboring gene uncharacterized LOC101928128 Neighboring gene zinc finger protein 711

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC129748

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cristae formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cristae formation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in inner mitochondrial membrane organization IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    MICOS complex subunit MIC27
    Names
    AAIR8193
    family with sequence similarity 121A
    mitochondrial contact site and cristae organizing system subunit 27

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021245.2 RefSeqGene

      Range
      4979..94417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_198450.6NP_940852.3  MICOS complex subunit MIC27 precursor

      See identical proteins and their annotated locations for NP_940852.3

      Status: REVIEWED

      Source sequence(s)
      AK130506, BE328646, Z83820, Z99571
      Consensus CDS
      CCDS48138.1
      UniProtKB/Swiss-Prot
      Q3KNU7, Q5H9D1, Q6UXV4
      Related
      ENSP00000362268.2, ENST00000373173.7
      Conserved Domains (1) summary
      pfam09769
      Location:55179
      ApoO; Apolipoprotein O

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      85003877..85093315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017029272.2XP_016884761.1  MICOS complex subunit MIC27 isoform X1

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      83432345..83522274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054326470.1XP_054182445.1  MICOS complex subunit MIC27 isoform X2

    2. XM_054326469.1XP_054182444.1  MICOS complex subunit MIC27 isoform X1

    3. XM_054326471.1XP_054182446.1  MICOS complex subunit MIC27 isoform X3