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    EGFR-AS1 EGFR antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100507500, updated on 10-Oct-2023

    Summary

    Official Symbol
    EGFR-AS1provided by HGNC
    Official Full Name
    EGFR antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:40207
    See related
    Ensembl:ENSG00000224057 AllianceGenome:HGNC:40207
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in placenta (RPKM 4.4), small intestine (RPKM 1.8) and 18 other tissues See more
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    Genomic context

    Location:
    7p11.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (55179750..55188949, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (55340174..55349373, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (55247443..55256642, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 5 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55049579-55050078 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:55052801-55054000 Neighboring gene uncharacterized LOC105375284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55087710-55088384 Neighboring gene epidermal growth factor receptor Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55134605-55135181 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:55141370-55142569 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26009 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26010 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55198912-55199819 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:55200333-55201532 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26011 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55214270-55214808 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55219798-55220606 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:55223847-55225046 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55248893-55249512 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55249513-55250132 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55253294-55254067 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:55259777-55260662 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:55281927-55282427 Neighboring gene OCT4 hESC enhancer GRCh37_chr7:55304767-55305286 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:55307850-55309049 Neighboring gene solute carrier family 19 member 3 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18186 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18187 Neighboring gene EGFR long non-coding downstream RNA Neighboring gene calmodulin 1 pseudogene 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_047551.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA004947, AC006977
      Related
      ENST00000442411.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      55179750..55188949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      55340174..55349373 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)