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    atf31 DNA-binding transcription factor Atf31 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541860, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atf31
    Official Full Name
    DNA-binding transcription factor Atf31
    Primary source
    PomBase:SPAC22F3.02
    Locus tag
    SPOM_SPAC22F3.02
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See atf31 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (705042..707473, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene ncRNA Neighboring gene ATP-dependent DNA translocase Rdh54 Neighboring gene phosphoacetylglucosamine mutase Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of multicopy suppressors of the calcium sensitivity of a mutant lacking the bZIP transcription factor Atf1 in fission yeast. Ohmiya R, et al. Mol Gen Genet, 1999 Mar. PMID 10102365
    2. Transcriptional regulatory network for sexual differentiation in fission yeast. Mata J, et al. Genome Biol, 2007. PMID 17927811, Free PMC Article
    3. Conjugation, meiosis, and the osmotic stress response are regulated by Spc1 kinase through Atf1 transcription factor in fission yeast. Shiozaki K, et al. Genes Dev, 1996 Sep 15. PMID 8824587
    4. The transcriptional program of meiosis and sporulation in fission yeast. Mata J, et al. Nat Genet, 2002 Sep. PMID 12161753
    5. Abo1 is required for the H3K9me2 to H3K9me3 transition in heterochromatin. Dong W, et al. Sci Rep, 2020 Apr 8. PMID 32269268, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    DNA-binding transcription factor Atf31

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      705042..707473 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018438.3 → NP_593039.1  DNA-binding transcription factor Atf31 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593039.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09771
      Conserved Domains (1) summary
      cd14687
      Location:123 → 183
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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