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    glycosyl hydrolase family 81 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831444, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glycosyl hydrolase family 81 protein
    Primary source
    TAIR:AT5G15870
    Locus tag
    AT5G15870
    See related
    Araport:AT5G15870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N13.10; F1N13_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (5182367..5184948, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene CONSTANS-like 1 Neighboring gene uncharacterized protein Neighboring gene prenylcysteine methylesterase Neighboring gene golgin family A protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 21 Neighboring gene TRICHOME BIREFRINGENCE-LIKE 19

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_121592.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables endo-1,3(4)-beta-glucanase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    glycosyl hydrolase family 81 protein
    NP_197091.1
    • glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: response to cyclopentenone; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT1G18310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5182367..5184948 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121592.2 → NP_197091.1  glycosyl hydrolase family 81 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197091.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7K8, Q9LFT3
      Conserved Domains (1) summary
      pfam03639
      Location:63 → 710
      Glyco_hydro_81; Glycosyl hydrolase family 81
    Nucleotide Protein
    Heading Accession and Version

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