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    Inosine triphosphate pyrophosphatase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827006, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Inosine triphosphate pyrophosphatase family protein
    Primary source
    TAIR:AT4G13720
    Locus tag
    AT4G13720
    See related
    Araport:AT4G13720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18A5.110; F18A5_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (7966805..7968965, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene purple acid phosphatase 23 Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_117446.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Inosine triphosphate pyrophosphatase family protein
    NP_567410.1
    • Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: hydrolase activity, pyrophosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ham1-like protein (InterPro:IPR002637); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7966805..7968965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340876.1 → NP_001328955.1  Inosine triphosphate pyrophosphatase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B687, A0A7G2EZC6

    2. NM_117446.3 → NP_567410.1  Inosine triphosphate pyrophosphatase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567410.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZI5, Q8L968, Q9SVP0
      UniProtKB/TrEMBL
      A0A5S9XTT2, A0A654FNX7, A0A7G2EZC6
      Conserved Domains (1) summary
      cd00515
      Location:16 → 191
      HAM1; NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L968.1

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