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    ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843602, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
    Primary source
    TAIR:AT1G72700
    Locus tag
    AT1G72700
    See related
    Araport:AT1G72700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28P22.11; F28P22_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (27365772..27371784)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene neurofilament heavy protein Neighboring gene ncRNA Neighboring gene casein kinase 1-like protein 2 Neighboring gene hypothetical protein (DUF3511) Neighboring gene DEA(D/H)-box RNA helicase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Lipid Flippases ALA4 and ALA5 Play Critical Roles in Cell Expansion and Plant Growth. Davis JA, et al. Plant Physiol, 2020 Apr. PMID 32051180, Free PMC Article
    2. Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters. Zhang X, et al. Plant Cell, 2020 May. PMID 32193204, Free PMC Article
    3. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001334546.1
    NM_001334547.1
    NM_105929.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables P-type ion transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables flippase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in phospholipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein localization involved in auxin polar transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
    NP_177414.1
    • ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27365772..27371784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105929.5 → NP_177414.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177414.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SGG3
      UniProtKB/TrEMBL
      A0A178WGF7, A0A5S9WTT9, A0A654EPY1
      Conserved Domains (1) summary
      TIGR01652
      Location:58 → 1163
      ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase

    2. NM_001334546.1 → NP_001322800.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SGG3
      UniProtKB/TrEMBL
      A0A178WGF7, A0A5S9WTT9, A0A654EPY1
      Conserved Domains (1) summary
      TIGR01652
      Location:58 → 1163
      ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase

    3. NM_001334547.1 → NP_001322799.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SGG3
      UniProtKB/TrEMBL
      A0A178WGF7, A0A5S9WTT9, A0A654EPY1
      Conserved Domains (1) summary
      TIGR01652
      Location:58 → 1163
      ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SGG3.1

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