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    PDLP2 plasmodesmata-located protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839502, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PDLP2
    Official Full Name
    plasmodesmata-located protein 2
    Primary source
    TAIR:AT1G04520
    Locus tag
    AT1G04520
    See related
    Araport:AT1G04520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19P19.1; F19P19_1; plasmodesmata-located protein 2
    Summary
    Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata.
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    Genomic context

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    See PDLP2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (1231452..1234032)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CCT motif family protein Neighboring gene MOS4-associated complex 3A Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A family of plasmodesmal proteins with receptor-like properties for plant viral movement proteins. Amari K, et al. PLoS Pathog, 2010 Sep 23. PMID 20886105, Free PMC Article
    2. Specific targeting of a plasmodesmal protein affecting cell-to-cell communication. Thomas CL, et al. PLoS Biol, 2008 Jan. PMID 18215111, Free PMC Article
    3. The plasmodesmal protein PDLP1 localises to haustoria-associated membranes during downy mildew infection and regulates callose deposition. Caillaud MC, et al. PLoS Pathog, 2014 Oct. PMID 25393742, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100331.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within plasmodesmata-mediated intercellular transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within transport of virus in multicellular host IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasmodesmata-located protein 2
    NP_171946.2
    • plasmodesmata-located protein 2 (PDLP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, plasmodesmata-mediated intercellular transport; LOCATED IN: plasmodesma; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 3 (TAIR:AT2G33330.1); Has 1091 Blast hits to 1028 proteins in 65 species: Archae - 0; Bacteria - 64; Metazoa - 5; Fungi - 13; Plants - 1007; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1231452..1234032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100331.4 → NP_171946.2  plasmodesmata-located protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171946.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93806, P93807, Q6NM73
      UniProtKB/TrEMBL
      A0A178WKV6, A0A5S9SKX0
      Conserved Domains (1) summary
      pfam01657
      Location:39 → 132
      Stress-antifung; Salt stress response/antifungal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NM73.1

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