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    SPX3 SPX domain protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819120, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SPX3
    Official Full Name
    SPX domain protein 3
    Primary source
    TAIR:AT2G45130
    Locus tag
    AT2G45130
    See related
    Araport:AT2G45130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA SPX DOMAIN GENE 3; ATSPX3; SPX domain gene 3; T14P1.6
    Summary
    Expression is upregulated in the shoot of cax1/cax3 mutant.
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    Genomic context

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    See SPX3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (18606410..18607853)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene expansin B4 Neighboring gene C2H2-like zinc finger protein Neighboring gene RING/U-box superfamily protein Neighboring gene plant VAP homolog 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the AtSPX3 Promoter Elucidates its Complex Regulation in Response to Phosphorus Deficiency. Li Y, et al. Plant Cell Physiol, 2016 Aug. PMID 27382128
    2. Characterization of a sub-family of Arabidopsis genes with the SPX domain reveals their diverse functions in plant tolerance to phosphorus starvation. Duan K, et al. Plant J, 2008 Jun. PMID 18315545
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130076.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to phosphate starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of cellular response to phosphate starvation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SPX domain protein 3
    NP_182038.1
    • SPX domain gene 3 (SPX3); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 942 Blast hits to 942 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 375; Plants - 276; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18606410..18607853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130076.2 → NP_182038.1  SPX domain protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182038.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5PP62
      UniProtKB/TrEMBL
      A0A654F3B8
      Conserved Domains (2) summary
      cd14481
      Location:2 → 131
      SPX_AtSPX1_like; SPX domain of the plant protein SPX1 and similar proteins
      pfam03105
      Location:3 → 143
      SPX; SPX domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5PP62.1

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