LOC100130331 POTE ankyrin domain family, member F pseudogene [Homo sapiens (human)] - Gene

Summary

Gene symbol: LOC100130331
Gene description: POTE ankyrin domain family, member F pseudogene
See related: Ensembl:ENSG00000237250
Gene type: pseudo
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression: Low expression observed in reference dataset See more
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Genomic context

Location:: 1q43

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	1	NC_000001.11 (237862175..237928321)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	1	NC_060925.1 (237273483..237339549)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	1	NC_000001.10 (238025475..238091621)

Chromosome 1 - NC_000001.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

PMC137757P2 (e-PCR)
- UniSTS:270854

PMC99880P2 (e-PCR)
- UniSTS:273691

PMC85361P1 (e-PCR)
- UniSTS:273471

SHGC-111829 (e-PCR)
- UniSTS:168771

PMC23952P1 (e-PCR)
- UniSTS:272216

PMC133998P8 (e-PCR)
- UniSTS:270713

PMC356969P12 (e-PCR)
- UniSTS:273274

SHGC-111573 (e-PCR)
- UniSTS:168406

RH103683 (e-PCR)
- UniSTS:98008

SHGC-76577 (e-PCR)
- UniSTS:23287

PMC129447P1 (e-PCR)
- UniSTS:270591

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.