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    NUAK1 NUAK family kinase 1 [ Homo sapiens (human) ]

    Gene ID: 9891, updated on 28-Oct-2024

    Summary

    Official Symbol
    NUAK1provided by HGNC
    Official Full Name
    NUAK family kinase 1provided by HGNC
    Primary source
    HGNC:HGNC:14311
    See related
    Ensembl:ENSG00000074590 MIM:608130; AllianceGenome:HGNC:14311
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ARK5
    Summary
    Enables p53 binding activity and protein serine/threonine kinase activity. Involved in protein phosphorylation; regulation of cell adhesion; and regulation of cellular senescence. Located in cytoplasm; microtubule cytoskeleton; and nuclear lumen. Implicated in uterine fibroid. Biomarker of uterine fibroid. [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Broad expression in brain (RPKM 19.6), skin (RPKM 9.2) and 19 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See NUAK1 in Genome Data Viewer
    Location:
    12q23.3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (106063345..106138954, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (106026098..106101716, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (106457123..106532732, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6943 Neighboring gene uncharacterized LOC105369960 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6944 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:106254933-106255434 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:106289604-106290350 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:106290351-106291097 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:106291098-106291844 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:106328523-106329722 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:106348645-106349844 Neighboring gene ST13, Hsp70 interacting protein pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:106474669-106475169 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:106492406-106492991 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:106494441-106494974 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106500655-106501400 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106501401-106502144 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106502145-106502889 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106508970-106509546 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106509547-106510123 Neighboring gene uncharacterized LOC124903007 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106523693-106524442 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106524443-106525192 Neighboring gene Sharpr-MPRA regulatory region 11062 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:106526214-106527056 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106527057-106527900 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:106527901-106528743 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:106531161-106531662 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:106534054-106534673 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:106541977-106542476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:106581756-106582590 Neighboring gene thyroid hormone receptor interactor 11 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:106605939-106606439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6945 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4812 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4813 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4814 Neighboring gene cytoskeleton associated protein 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    APOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study.
    EBI GWAS Catalog
    Genome-wide data reveal novel genes for methotrexate response in a large cohort of juvenile idiopathic arthritis cases.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • KIAA0537

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H2AS1 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables p53 binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein serine/threonine kinase activity TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in fibrillar center IDA
    Inferred from Direct Assay
    more info
     
    located_in microtubule cytoskeleton IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    NUAK family SNF1-like kinase 1
    Names
    AMP-activated protein kinase family member 5
    AMPK-related protein kinase 5
    NUAK family, SNF1-like kinase, 1
    omphalocele kinase 1
    NP_055655.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_014840.3NP_055655.1  NUAK family SNF1-like kinase 1

      See identical proteins and their annotated locations for NP_055655.1

      Status: VALIDATED

      Source sequence(s)
      AB011109, AC011595, AK027302, BG831390, BQ694341, CK001516, R61142
      Consensus CDS
      CCDS31892.1
      UniProtKB/Swiss-Prot
      A7MD39, O60285, Q96KA8
      Related
      ENSP00000261402.2, ENST00000261402.7
      Conserved Domains (2) summary
      smart00220
      Location:55306
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14073
      Location:53306
      STKc_NUAK; Catalytic domain of the Serine/Threonine Kinase, novel (nua) kinase family NUAK

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      106063345..106138954 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      106026098..106101716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)